Lotus japonicus



Arabidopsis Lotus Chlamydomonas Porphyra Red clover

105,673 ESTs

Kazusa AV406328-AV429310
AV764664-AV781337
AU254043-AU254058
AB074987-AB074990, AB084239
BP028252-BP086051
Iwate U. AU088751-AU089648
Kagawa U. DC592852-DC600171

笆 List with Search resultsagainst the non-redundant protein database.
  • Consensus sequences assembled from 3' ESTs

(e.g. KMC000001A, KMC000001A_c03, GENLf027d03)
  • EST sequences

Input accession number(s) or clone name(s).
Multiple names (space or comma delimited) are accepted.
(e.g. AV407701-05,MWM057b03 MWM142b05)
笆 Search interface
  • Keyword Search

    Sort by:

    example) kinase
    example) AV406328
    example) AV406328 AND kinase
    example) AV406328 OR kinase
笆 Expression analysis
  • cDNA array experiment

  • Serial Analysis of Gene Expression (SAGE)
Asamizu E, Nakamura Y, Sato S, Tabata S
Comparison of the Transcript Profiles from the Root and the Nodulating Root of the Model Legume Lotus japonicus by Serial Analysis of Gene Expression
Molecular Plant-Microbe Interactions, 18, 487-498 (2005)

<  Supplemental Data for the Publication  >
Suppl. Table 2A. Abundant tags found in the root library
Suppl. Table 2B. Abundant tags found in the nodulating root library
Suppl. Table 3A. Complete list of 407 tag species that showed statistically significant increase in the nodulating root
Suppl. Table 3B. Complete list of 428 tag species that showed statistically significant increase in the root

笆 References
Nomura M, Tan DV, Arunothayanan H, Asamizu E, Tabata S, Kouchi H, Tajima S
The 5'-end expressed sequence tags of Lotus japonicus
Plant Biotechnology, 25, 173-175 (2008)

Asamizu E, Nakamura Y, Sato S, Tabata S
Characteristics of the Lotus japonicus Gene Repertoire Deduced from Large-Scale Expressed Sequence Tag (EST) Analysis.
Plant Molecular Biology, 54, 405-414 (2004)
<  Supplemental Data for the Publication  >
Suppl. 1. List of the 471 contig sequences conserved only in leguminous plants [HTML] [excel]
Suppl. 2. The complete list of GO categories classified by the similarity level between the Arabidopsis genes [HTML] [excel]

Asamizu E, Nakamura Y, Sato S, Tabata S
Generation of 7137 Non-redundant Expressed Sequence Tags from a Legume,Lotus japonicus.
DNA Research, 7, 127-130 (2000)
<  Figures and Tables  >

Endo M, Kokubun T, Takahata Y, Higashitani A, Tabata S, Watanabe M
Analysis of Expressed Sequence Tags of Flower Buds in Lotus japonicus.
DNA Research, 7, 213-216 (2000)

DNA Research Online at http://dnaresearch.oxfordjournals.org/
笆 Download sequence:
  5' EST. ( Fasta format, 3.2 MB )   3' EST. ( Fasta format, 12.6 MB )
  Iwate EST. ( Fasta format, 0.2 MB )
  Kagawa EST. ( Fasta format, 1.4 MB )
笆 Clone requests
Kazusa DNA Research Institute